Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs201889615 chr10:43519058 T/TG 4.3E-5 289 25.67 25.95 11.43 KM Plot
KIRP rs202145180 chr10:43452585 AT/A 2.52E-5 285 25.93 26.4 11.43 KM Plot
KIRP rs2022448 chr6:26207928 C/T 3.91E-7 289 26 25.63 19.27 KM Plot
KIRP rs2051043 chr10:43479935 G/T 5.49E-5 289 25.58 27.4 11.43 KM Plot
KIRP rs2070107 chr17:56423201 C/G 5.67E-5 289 26.28 25.08 9.77 KM Plot
KIRP rs2074871 chr17:10221970 A/G 1.23E-5 288 26.28 24.4 15.53 KM Plot
KIRP rs2074875 chr17:10223586 A/G 2.57E-5 281 26.28 25.57 15.53 KM Plot
KIRP rs2074876 chr17:10223697 G/T 1.66E-5 280 26.37 25.57 15.53 KM Plot
KIRP rs2083425 chr3:124496888 G/T 4.08E-5 285 26.1 25.7 16.47 KM Plot
KIRP rs2088917 chr5:156432215 A/G 5.29E-6 288 12.1 25.57 26.28 KM Plot
KIRP rs2090095 chr11:78034020 G/A 0.00014 286 26.38 26.37 20.27 KM Plot
KIRP rs2131921 chr1:235705157 C/T 6.39E-5 289 24.67 30.7 15.83 KM Plot
KIRP rs2140667 chr10:88307394 C/T 2.04E-7 283 26.38 23.1 9.77 KM Plot
KIRP rs2156316 chr21:44269825 G/A 2.28E-6 286 25.6 37.87 16.35 KM Plot
KIRP rs2166998 chr4:59714030 C/T 0.000171 280 24.67 28.12 23.23 KM Plot